This is a test version of Biostars. For the public version, visit https://www.biostars.org.
rs number of an article PMID: 15816807

Hi all,

In the article of Miwa: https://www.ncbi.nlm.nih.gov/pubmed/15816807 They mention a polymorphism M429V of the gene ABCG8, I need the rs number of this SNP but I couldn't find it. Could someone provide this SNP.

Thank you in advance.

snp
• 1,508 views • link
updated by Pierre Lindenbaum Pierre Lindenbaum • written by fatma.mokhtar • fatma.mokhtar

1 answer

Using backlocate, it looks like the variant would be in the BED interval 2:44100998-44101000 .

#User.Gene  AA1 petide.pos.1    AA2 transcript.name transcript.id   transcript.strand   transcript.AA   index0.in.rna   wild.codon  potential.var.codons    base.in.rna chromosome  index0.in.genomic   exon    messages    extra.user.data
ABCG8   Met 429 Val ABCG8   ENST00000272286 +   M   1284    ATG GTG A   2   44100998    ENST00000272286.Exon9   .   .
ABCG8   Met 429 Val ABCG8   ENST00000272286 +   M   1285    ATG GTG T   2   44100999    ENST00000272286.Exon9   .   .
ABCG8   Met 429 Val ABCG8   ENST00000272286 +   M   1286    ATG GTG G   2   44101000    ENST00000272286.Exon9

. .

This position would be https://www.ncbi.nlm.nih.gov/snp/rs147194762

• 0 views • link
written by Pierre Lindenbaum Pierre Lindenbaum

Log in to answer this question.

More posts like this