This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Fimo and PSSM

I have a set of fimo (meme-suite) results as either html, gff, xml or tsv files. Is there a way to somehow convert these into position specific scoring matrix files?

fimo pssm

It's pretty easy to parse the text files, the tsv might even be the PWM. I did this a while ago

0 answers

No answers yet.

Log in to answer this question.