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mcsimenc
mcsimenc
Reputation:
30
Joined:
9.6 years ago
Last seen:
1.2 years ago
Location:
California, USA
Latest posts by user
2 votes
0 replies
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Answer: Answer: IGV track display problem: interval rectangle from BED file appears above all tr
written by mcsimenc • mcsimenc
0 votes
1 reply
1.9K views
IGV track display problem: interval rectangle from BED file appears above all tracks in white, overlapping each other
igv bed
written by mcsimenc • mcsimenc
0 votes
3 replies
1.9K views
Forum: What is meant by referring to research studies as "stories"?
articles science story genomics
updated by ATpoint ATpoint • written by mcsimenc • mcsimenc
0 votes
0 replies
1.1K views
HOMER findPeaks: what does -fdr actually do?
homer atac-seq calling peak dap-seq chip-seq
written by mcsimenc • mcsimenc
0 votes
0 replies
730 views
stringdb - where is a description of the database download tables?
stringdb
updated by GenoMax GenoMax • written by mcsimenc • mcsimenc
0 votes
0 replies
900 views
MEME PWM format - what is the meaning of nsites?
motif sequence meme-suite pwm meme
written by mcsimenc • mcsimenc
0 votes
1 reply
0 views
Comment: Comment: What is a command-line program to bootstrap multiple protein sequence alignment?
written by mcsimenc • mcsimenc
0 votes
1 reply
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Comment: Comment: What is a command-line program to bootstrap multiple protein sequence alignment?
written by mcsimenc • mcsimenc
0 votes
5 replies
2.9K views
seqboot ERROR: sequences out of alignment (SOLVED)
alignment sequence protein bootstrap phylogenetics
updated by ATpoint ATpoint • written by mcsimenc • mcsimenc
0 votes
0 replies
1.2K views
snpEff problems adding regulatory regions to database
snp snpeff gwas tfbs
written by mcsimenc • mcsimenc
0 votes
1 reply
950 views
GWAS - need software that outputs effect size and se or variance
gwas
updated by Helix • Helix • written by mcsimenc • mcsimenc
0 votes
0 replies
0 views
Comment: Comment: DESeq2 batch effects with nonuniform design matrix
written by mcsimenc • mcsimenc
0 votes
1 reply
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Comment: Comment: DESeq2 batch effects with nonuniform design matrix
written by mcsimenc • mcsimenc
0 votes
4 replies
1.7K views
DESeq2 batch effects with nonuniform design matrix
deseqdataset deseq2 batch
updated by Ram Ram • written by mcsimenc • mcsimenc
0 votes
1 reply
0 views
Comment: Comment: DESeq2 use of factors for colData
written by mcsimenc • mcsimenc
0 votes
3 replies
1.7K views
DESeq2 use of factors for colData
deseq2 expression differential
updated by swbarnes2 swbarnes2 • written by mcsimenc • mcsimenc
0 votes
1 reply
4.2K views
DeepTools plotProfile y axis units?
deeptools plotprofile plotheatmap
updated by Devon Ryan Devon Ryan • written by mcsimenc • mcsimenc
0 votes
1 reply
3.0K views
cellranger: min gene count and UMI/cell filter?
10x genomics cellranger qc scrna-seq
updated by swbarnes2 swbarnes2 • written by mcsimenc • mcsimenc
0 votes
1 reply
0 views
Comment: C: NCBI SRA AWS AMI
written by mcsimenc • mcsimenc
0 votes
0 replies
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Comment: A: Salmon auxiliary output
written by mcsimenc • mcsimenc
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