try to change this line: https://github.com/JamesABaker/complexity_in_pymol/blob/46b044d13b7930455878aab42e1fbdfd3f05eea4/pymol/phobius.pl#L32
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I installed Phobius and it's working fine, but when I add option -png it doesn't make any plot and prints in terminal:
set terminal png transparent small color xffffff x000000 x000000 xA0A0A0 x00CF00 x0000FF x66CCCC x0000FF xFF0000
^
"./aaaa.gnuplot", line 24: unrecognized terminal option
Do i need to change some settings in gnuplot or install something more or anything else?
As far as I can see there is not such option "color" in gnuplot: http://gnuplot.sourceforge.net/docs_4.2/node409.html
set terminal png
{{no}transparent} {{no}interlace}
{{no}truecolor} {rounded|butt}
{tiny | small | medium | large | giant}
{font <face> {<pointsize>}}
{size <x>,<y>} {{no}crop}
{{no}enhanced}
{<color0> <color1> <color2> ...}
i would say it's a problem with the tool that generated the gnuplot script.
try to change this line: https://github.com/JamesABaker/complexity_in_pymol/blob/46b044d13b7930455878aab42e1fbdfd3f05eea4/pymol/phobius.pl#L32
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