I have 10x single-cell multiomic CITE-Seq data with RNA gene expression and cell surface markers. I used Seurat to create a WNN UMAP that combines …

Hello, I am currently analyzing a publically available dataset with ~200 samples. I want to cluster the samples based on their expression to identify disease …

Consider a single cell RNA seq data with a control and a test sample. These are integrated to minimize the batch effect. Reads have been …

Hi, I am trying to find receptor coexpression at the single-cell level using scRNA-seq data generated using 10X chemistry. Given the dropout and doublet rate, …

I am trying to find a toll/ software/ package that can identify cell specific pathways in ScRNA-seq data. I have analyzed the data and has …

I am generating single nuclei RNAseq and was wondering is there a work flow. How different it may be from single cell RNAseq. There are …

A paper I read recently mentioned in the methods that the authors performed copy number variation analysis on their single cell data, but neglected to …

IS it possible to assign a starting cell type for peusdotime trajectory in Monocle 2 or 3? I am analyzing RNAseq. Could not find on …

Dear member, I am trying to perform lineage analysis with single cell RNA sequencing data. recently I have came across trajectory analysis with monocle. As …

Hey, Do you guys know is there is free software available that can perform the same analysis as geo2r. I could always do the same …