This is a test version of Biostars. For the public version, visit https://www.biostars.org.
nhaus
nhaus
Reputation:
440 (New)
Joined:
6.5 years ago
Last seen:
2.0 years ago
Location:
Germany
Latest posts by user
0 votes
1 reply
1.8K views
Using Pseudobulk Approach for Identifying Marker Genes Within a Single Condition
differential-expression single-cell pseudobulk
updated by ATpoint 9.1K • | written by nhaus 44
0 votes
0 replies
795 views
Linear Mixed Model for Differential Gene Expression in Single-Cell RNAseq with Batch Effects
mast differential-expression lmer
updated by Ram 4.5K • | written by nhaus 44
0 votes
0 replies
0 views
Comment: Comment: Specifying a variable as a random effect in model.matrix()
written by nhaus 44
0 votes
2 replies
1.3K views
Go from protein mutation back to gene mutation
mutations tools
updated by GenoMax 16K • | written by nhaus 44
12 votes
5 replies
4.1K views
Tutorial: removeBatchEffect explained using base R linear models
removebatcheffects limma batch-effect
updated by SamGG 15 • | written by nhaus 44
0 votes
0 replies
0 views
Comment: Comment: differential gene expression analysis when not all samples have an untreated cou
written by nhaus 44
0 votes
0 replies
660 views
Surrogate variable analysis for paired RNA seq experiment
sva rnaseq ruvseq
written by nhaus 44
0 votes
2 replies
1.5K views
differential gene expression analysis when not all samples have an untreated counterpart
differential-expression edger
written by nhaus 44
1 vote
1 reply
0 views
Answer: Answer: Analyzing dataset with counts and TMM values?
written by nhaus 44
0 votes
0 replies
0 views
Comment: Comment: pseudobulk differential expression design matrix
written by nhaus 44
0 votes
0 replies
0 views
Comment: Comment: pseudobulk differential expression design matrix
written by nhaus 44
0 votes
3 replies
1.4K views
pseudobulk differential expression design matrix
pseudobulk single-cell scrna-seq
written by nhaus 44
0 votes
0 replies
784 views
Correcting for covariates in GWAS studies and differential gene expression analysis
batch-correction gwas
updated by Ram 4.5K • | written by nhaus 44
0 votes
1 reply
1.3K views
GSA type of input data
vst gsea deseq2
updated by Gordon Smyth 916 • | written by nhaus 44
0 votes
1 reply
1.1K views
Quantifying GFP and GAL4 reads in drosophila
salmon qunatification read
updated by seidel 1.1K • | written by nhaus 44
0 votes
0 replies
0 views
Answer: Answer: How to replace Gene Symbols with Ensembl ID?
written by nhaus 44
1 vote
0 replies
759 views
Libtype differs for all samples although same library preparation
salmon rnaseq libtype
written by nhaus 44
1 vote
1 reply
0 views
Comment: Comment: DESeq2 design formula considerations
written by nhaus 44
0 votes
6 replies
8.3K views
DESeq2 design formula considerations
differential rnaseq expression analysis dge deseq2
updated by LauferVA 497 • | written by nhaus 44
1 vote
1 reply
0 views
Comment: Comment: gvcf to bam or fastq
written by nhaus 44
Latest awards to user
TODO: Awards