About the method for removing the SNP markers with more than 10% of missing data?
Hi~ everyone.
For the QTL analysis, I conducted the GBS getting SNP markers for the establishment of the genetic map. However, there are some SNP markers with too much missing data, I would like to discard these SNPs.
Is there any tool that can discard the SNP markers with more than 10% of missing data from the VCF file?
Thank you so much
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r00628112 •
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