convert it to a fasta file?
Can the file from the link below be converted to a file that can be used with igv, such as fasta or fastaq?
sequencing
rna-seq
chip-seq
next-gen
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wngusgus1004 •
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home work? wngusgus1004
need it for methylation analysis.
On a cursory look, it seems the DMRcate BioConductor package can convert the array data to bedGraph, which then can be visualized in IGV.
Thanks for the info. What file type or format should I use to use DMRcate?
I had only a cursory look at DMRcate, I never used it. I am afraid you will have to read the documentation and figure out by yourself.