tools for analysisng whole genome metagenome sequence from nanopore
I wish to analyse a whole genome metagenome sequence of ONT. Kindly guide on the right tools to analyse that
next-gen
• 723 views
•
link
written
by
kkalyani8192 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Newbie Bioinformatics
written by Genome_Learner •Hi I am basically a wet lab guy and I am trying to learn bioinformatics analysis with ONT data sets. Kindly guide me on where …
-
Tools that extract insert sequences?
written by aveadj •If I know the flanking sequences to the left and right, are there tools that can return a fasta/fastq file of just my insertion sequences? …
-
genome status
written by thatoestherndana •Greetings May I kindly know the difference between a genome status of whole genome and of a metagenome, and if a metagenomic sequence can be …
-
Extracting complete genome sequence from raw reads
written by Rajagunalan •Hi all I have not much knowledge on bioinformatics so need your valuable suggestions in my work I have carried out a whole genome metagenome …
-
Type of analyses Which can be performed on Whole Genome Data
written by SomeOne •Hey everyone, This might be a nieve question, kindly spare me. I want to know about type of analyses which can be performed on whole …
-
Removal of host reads from shotgun metagenomics data.
written by dharitrisaikia162 •The presence of host sequence in shotgun metagenome data is considered as contamination and it is removed by mapping with a reference genome in different …
-
How to analyse lncRNA
written by darshininambiar •Dear All, I am new to bioinformatics and my research needs to analyse lncRNA from a RNA Seq data. I have tried to use GSEA …
-
Time taken for MEGAN analysis
written by kkalyani8192 •Hello, I would like to know the time taken for megan analysis. I have uploaded the .sam file almost 48-50 hours back(whole genome metagenome) and …
-
Input file for megan
written by kkalyani8192 •Hello, I intend yo do whole genome metagenome analysis for a single sample run on nanopore on megan. KIndly help regarding the methods for input …
-
Analysis tools to compare two similar Illumina targeted sequencing runs?
written by 14134125465346445What are the commonly used analysis tools to compare two similar targeted sequencing runs done with Illumina? The type of analysis I am thinking could …