This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Protein sequences prediction with Glimmer3

Hello everyone,

I want to translate genome into protein sequences. I know that prodigal can do that, but I want to use another program to compare the results. I chose Glimmer3 but I can only get gene sequence from it, not protein sequence.

Can someone explain to me what I need to do?

Thanks very much!

glimmer

Glimmer is a coding sequence predictor, so you simply need to translate the results from Glimmer with an appropriate translation table for your organism.

0 answers

No answers yet.

Log in to answer this question.