This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Does SPAdes assembler lose singlets?

Hi all,

Does anyone know if the SPAdes assembler loses singlets (unassembled strings)? In other words, if it is run on partially assembled deduped genome, will it lose all contigs that can't be further joined?

Thanks for any advice.

spades assembly genomes

0 answers

No answers yet.

Log in to answer this question.