Does SPAdes assembler lose singlets?
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4.7 years ago
stacy734 ▴ 40

Hi all,

Does anyone know if the SPAdes assembler loses singlets (unassembled strings)? In other words, if it is run on partially assembled deduped genome, will it lose all contigs that can't be further joined?

Thanks for any advice.

spades assembly genomes • 647 views
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