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Merging SNV and DIV vcfs of the same Individual

This feels like it should be something simple, and yet I am having trouble finding what will do it properly. I have a SNV and DIV vcf of the SAME individual that I'd like to merge together into 1 single vcf. So far everything I've tried creates a vcf with 2 columns instead of a new vcf with 1 column for the individual.

What am I missing?

Ideas?

vcf
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updated by bari.ballew bari.ballew • written by bseanile • bseanile

Hello bseanile ,

So far everything I've tried

please show us what you have tried so far.

fin swimmer

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written by finswimmer finswimmer

1 answer

You want to concatenate (add rows), not merge (add individuals). See my answer here.

• 0 views • link
written by bari.ballew bari.ballew

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