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suzanne.mcgaugh
suzanne.mcgaugh
Reputation:
60
Joined:
13.2 years ago
Last seen:
11.2 years ago
Location:
United States

In this crowd, I am prob considered a newbie- I know some basic unix, some basic python. Trying to hack through some RNAseq data.

Latest posts by user
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Comment: Comment: REF, ALT not recoded after removing individual sample in VCFtools and VCFlib
updated by Ram Ram • written by suzanne.mcgaugh suzanne.mcgaugh
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1 reply
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Comment: Comment: REF, ALT not recoded after removing individual sample in VCFtools and VCFlib
updated by Ram Ram • written by suzanne.mcgaugh suzanne.mcgaugh
0 votes
1 reply
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Comment: Comment: REF, ALT not recoded after removing individual sample in VCFtools and VCFlib
updated by Ram Ram • written by suzanne.mcgaugh suzanne.mcgaugh
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1 reply
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Comment: Comment: REF, ALT not recoded after removing individual sample in VCFtools and VCFlib
updated by Ram Ram • written by suzanne.mcgaugh suzanne.mcgaugh
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2.2K views
Job: Postdoc University of Minnesota Population Genomics Cavefish
genome
updated by Ram Ram • written by suzanne.mcgaugh suzanne.mcgaugh
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8 replies
4.2K views
REF, ALT not recoded after removing individual sample in VCFtools and VCFlib
next-gen genome alignment
updated by Ram Ram • written by suzanne.mcgaugh suzanne.mcgaugh
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Comment: Comment: Trouble running CEGMA on the sample dataset
written by suzanne.mcgaugh suzanne.mcgaugh
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Answer: Answer: Trouble running CEGMA on the sample dataset
updated by Ram Ram • written by suzanne.mcgaugh suzanne.mcgaugh
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1 reply
4.5K views
bwa-0.7.12 AS:i and XS:i match but MAPQ = 0
mapq bwa
updated by Ram Ram • written by suzanne.mcgaugh suzanne.mcgaugh
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Comment: C: How To Know Percentage Of Identity Between Every Pair Of Orthologous Genes In Se
written by suzanne.mcgaugh suzanne.mcgaugh
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0 replies
96 views
Answer: A: Fastx Clipper Not Accurate In Adapter Clipping For 100Nt Reads
written by suzanne.mcgaugh suzanne.mcgaugh
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Answer: A: How To Know Percentage Of Identity Between Every Pair Of Orthologous Genes In Se
written by suzanne.mcgaugh suzanne.mcgaugh
2 votes
4 replies
7.0K views
Fastx Clipper Not Accurate In Adapter Clipping For 100Nt Reads
adaptor rnaseq illumina trimming galaxy fastx
updated by satanicodr satanicodr • written by suzanne.mcgaugh suzanne.mcgaugh
1 vote
2 replies
3.6K views
Looking For Better Hcluster_Sg Documentation Or Alternative Clustering Methods For The Ensembl Compara Pipeline
ensembl
updated by Ram Ram • written by suzanne.mcgaugh suzanne.mcgaugh
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