Is there any Java library or API for downloading NCBI refseq sequences? · Biostar

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Is there any Java library or API for downloading NCBI refseq sequences?

Hello,

I want to get refseq sequences on entering NM or NC numbers. For example I want to get the reference sequence of BRCA1 gene after giving 'NM_007294.3' as an argument. Is it possible to implement this with Java? Data source doesn't have to be NCBI, it could be UCSC genome browser or EMBL or anything else. Thank you in advance.

java refseq api

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written 7.0 years ago by opaleye83 •

jeutils may be the thing you are looking for. See: https://github.com/copeg/jeutils I don't think it's being actively maintained though.

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written 6.8 years ago by vkkodali_ncbi

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