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Error in peak calling using SPP package

Hello everyone

I am using spp package for finding the peaks in my Chip-seq data Problem is in the package there's a function find.binding.positions(), in which there are two methods WTD method and MTC method First i have no idea what theses methods means and second i have tried both of these methods and it gives error "Error in argfun(job) : object 'tag.wtd' not found" "Error in argfun(job) : object 'tag.lwcc' not found"

Please help !!

chip-seq peak calling spp

Do you solve the problem? I meet the same situation. Error in argfun(job) : object 'tag.lwcc' not found Calls: find.binding.positions ... sendData -> sendData.SOCKnode -> serialize -> argfun

Please Check your data whether it's single-end or paired-end ?? spp package works with single-end data only...

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