Thanks a lot. I am looking forward to try KaryoploteR.
• 0 views
•
link
written
by
angajalaanusha •
Chromosomal location mapping for miRNAs
I have chromosomal location or genome coordinates for list of miRNAs. Please advice me how can I make a figure to better visualize this data ?
I am interested in figures like this ( Figure 3) https://www.researchgate.net/figure/Genomic-organization-of-14q32-microRNA-miRNA-clusters-neighboring-the-DLK1-DIO3_fig3_51466062 https://erj.ersjournals.com/content/43/6/1740
• 1,702 views
•
link
written
by
angajalaanusha •
1 answer
To produce something similar to the second figure you can use karyoploteR.
Log in to answer this question.
More posts like this
-
Tutorial: Bulk RNA-seq: Different Expression Analysis with DEseq2
written by Julia Ma •
-
mirBase data to write a script to understand which is the dominant arm of a mirna duplex
written by bio_elle •
-
Tutorial: ClusterProfiler A software for functional enrichment of differentially expressed genes- A…
written by Novogene •
-
Job: Staff Scientist -- Bioinformatics
written by rizzla08 •
-
Splicing QTL plot
written by waqaskhokhar999
-
Job: Postdoctoral Research Position in Neuroimaging and Genomics of Addiction
written by Rm
-
precursor miRNAs from TCGA
written by Kostas •
-
Tutorial: Guide to TCGA data
written by Jordan Anaya
-
Which program, tool, or strategy do you use to visualize genomic rearrangements?
written by stianlagstad
Cross-posted on Bioconductor ( https://support.bioconductor.org/p/121444/ ). When you do this, please indicate it in your question so that people do not spend time answering something that may already have an answer.
Sorry about this.I did not know both sites are connected.I appologize.