This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Where to find a list of (sequenced) WHO reference strains

The world health organisation (WHO) is defining WHO reference strains for some pathogens (Need it mainly for bacteria and virus). And I guess many of them are sequenced.

Does anyone know where to find this database and where to fetch the corresponding genome assemblies?

genome
• 1,346 views • link
written by mschmid mschmid

2 answers

Yes, at NCBI by searching "assembly".

• 0 views • link
written by Buffo Buffo

My problem is to identify/find those assemblies. Fetching them from NCBI Assemblies database is no problem.

Do they have a special tag? How do I identify them?

And I am still interested in a database with all WHO reference strains.

• 0 views • link
written by mschmid mschmid

Log in to answer this question.

More posts like this