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Annotate CpG Islands for a new genome

Hello, we've sequenced a mammalian genome (~3.2gb) and are looking to annotate CpG islands. Ideally, we would get something like the UCSC annotation tracts, but I can't find a public pipeline for doing CpG island calling. Can anyone point me in the right direction? Thank you very much!

cpg assembly annotation

1 answer

See: A: CpG islands for ARS-UCD1.2 Bos taurus genome?

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