comparative genomics of eukaryotes
hi how can I do a genome comparative analysis of eukaryotic microorganisms. protocol, software .... can I compare chromosome by chromosome or all of the chromosomes at once
• 1,417 views
•
link
written
by
oussriradnane •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
SNPs profile on chromosome 1 curve
written by Nuglozeh •
-
Best practices in Fungal Genome Assembly
written by SomeOne •
-
GENE ONTOLOGY FOR TOMATO-ITAG4.1 OR 4
written by anusha •
-
Ensembl reference genomes and annotations by chromosome only.
written by devarts •
-
Comparative Genome analysis
written by netipandey.87 •
-
pulling out a single pseudochromosome from my vcf file
written by truebeliever24 •
-
Whole genome alignments
written by oussriradnane •
-
SNP absolute number or density between chromosomes
written by misterie
-
running GATK or Mutect or a somatic variant caller individual chromosomes
written by Bogdan
-
fungal genome annotation
written by sharma_tina189059 •
Question unclear, please elaborate. Specify which data you have and what exactly you aim to achieve. Make sure your question is not too broad, be as specific as possible.
I want to do a genome comparative study of a fungus, but the species have a different number of chromosomes, so how can I do
I assume you have sequence data for these chromosomes? You could start by using an aligner like
LASTZthat can try to align chromosome sized sequences (http://www.bx.psu.edu/~rsharris/lastz/README.lastz-1.04.00.html ).thank you