Hey everyone denovo, , assembly, illumina, short read, plant, genome, beginner I have a question regarding the de novo assembly of a plant genome. So …

HI, I have denovo transcriptome assembled file of a plant, I want to see the gene cluster for terpens. I do have genome data of …

I have genome sequencing data in vcf format that I would like to annotate using VEP. The genomic variants were called against the hs37d5 reference …

I want to get a variant in vcf file which is present in hetrozygous condition. for example if at a specific position 50 reads get …

Hi all, I have my own de-novo assembled reference genome and gff file. I aligned my data on newly assembled reference genome. I have now …

I have 14 plant cultivars and I want to find cnvs against a wild type. I am using lumpy express for each cultivar separately and …

I have a plant RNA-Seq data and I want to extract the transcript sequence of the some transcripts. How can I do that ??

Hey all, I know some of my past posts haven't made too much sense, so I hope this makes sense. I have a .gff file …

Hi All, Can anyone help? How can I annotate my microRNA data against MirBase. Initially, my microRNA data were mapped against the reference genome by …

Hi everyone, At present I want to using the ChIPseeker to annotate my maize Bed files ,while I see the manual ,it's seems that have …