This is a test version of Biostars. For the public version, visit https://www.biostars.org.
extract sequences that its identifier has specific word

hi

i have a file containing various RNAs, i want to extract sequences that its identifier has mRNA word.

> xxxx, mRNA
AAATTT

> xxxx, ncRNA
TTTAA

> xxxx, mRNA
ATAT

my output must be as below

> xxxx, mRNA
AAATTT

> xxxx, mRNA
ATAT
fasta

Hello kk.mahsa!

Questions similar to yours can already be found at:

We have closed your question to allow us to keep similar content in the same thread.

If you disagree with this please tell us why in a reply below. We'll be happy to talk about it.

Cheers!

PS: Answers/workable solutions can be found elsewhere on the forum, for instance: A: PARSE by gene name in biopython

0 answers

No answers yet.

Log in to answer this question.