Need sample vcf file containing Complete Exome sequences
I am looking for example files which contains complete exome sequencing.
or some filtered files which have stored after variant calling process. This will be helpful for further analysis of storing these data in some of the tech stacks.
• 2,063 views
•
link
written
by
mvkotekar •
1 answer
Try VCFs from the 1000 Genomes Project. Or VCFs in the NCBI.
• 0 views
•
link
written
by
Wan Shi Tong
Log in to answer this question.
More posts like this
-
Low Coverage WGS (Human) vs WES Hardware Requirements
written by rodrigo.sanchez •
-
Confirming called variants
written by priya.bmg •
-
What .bed file do I use for exome haplotype caller?
written by LeandroF. •
-
How take advantage of ERCC spike-ins to improve variant calling
written by danson.wooi •
-
Paternity Testing using clinical exome sequencing
written by Leon
-
Storing Varaint data from VCF
written by mvkotekar •
-
Forum: Types of sequencing and their precised use
written by Karma
-
Available database of Homo sapiens sequencing
written by cfarmeri
-
What is mutation calling in exome sequencing?
written by bioinforesearchquestions
-
frequently found false positives from exome seq
written by poisonAlien
you can download whole exome files from gnomAD site.
I went to 1000 Genome project. But could not explore much to identify Exome sequenced VCF files. Could anyone share the links or the portal?
Please use
ADD COMMENTorADD REPLYto answer to previous reactions, as such this thread remains logically structured and easy to follow. I have now moved your reaction but as you can see it's not optimal. Adding an answer should only be used for providing a solution to the question asked.