number of reads outside exonic regions in an exome sequencing experiment

Hi,

Can any experienced exome sequencing analysis/variant calling person let me know how many reads out of total reads do you expect to be outside exonic regions? I am observing around 30% of my total reads in some of my samples.

Regards, Prasun

exome next-gen sequencing

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written 5.6 years ago by prasundutta87 73

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