I am trying to use PAML for the first time, and I am like Alice falling in Rabbit's hole.
I tried to understand it using some online tutorials, but I am not sure if I understood it correctly.
I want to check for positive selection for a gene in different species.
Can someone please give me a step-wise guide with an easy explanation to use it.
Furthermore, I also want to know how to interpret the results.
Thank You very much!