PLINK --r2 square: snp ids are not written
Hey Guys, I'm running plink as bellow plink --r2 square --bfile [file] --out out and what I get is a matrix without any header, then where is the snp ids? How do I know which column correspond to which snp? Thanks
• 2,120 views
•
link
1 answer
You can use e.g. --write-snplist for that.
• 1 views
•
link
Log in to answer this question.