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Reciprocal blast hit

hello, I tried to find out homologous between two species for that I did reciprocal blast means A to B and B to A. so now I having two blast output in tabular format but now I do not how to find RBH.I searched for script but could not find suitable for my data. please help me..

rna-seq alignment next-gen
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updated by colindaven colindaven • written by BioBaby • BioBaby

1 answer

I like using proteinortho for this task. It will give you a single table containing reciprocal blast hits and just requires one command to run.

https://www.bioinf.uni-leipzig.de/Software/proteinortho/

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written by colindaven colindaven

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