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Differential transcript usage StageR error message
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So many Zeros (read counting)_NGS sequence analysis with R / Bioconductor: RNA-Seq workflow
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stacks denovo output directory can't be read in running genotypes program
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ABSOLUTE R package - CreateReviewObject Error, Error in seq_len(M) : argument must be coercible to …
written by calvi.c •Hi all, I am using the **R package ABSOLUTE** and ran the function **RunAbsolute** . My segment file (absolute.segment.numonly) looks like this: Chromosome Start End …
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WES samples failing ABSOLUTE
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ABSOLUTE MAF error
written by Alejandro Jimenez SanchezI am running ABSOLUTE 1.0.6 in R 3.4.0 When I do: RunAbsolute(seg.dat.fn, sigma.p, max.sigma.h, min.ploidy, max.ploidy, primary.disease, platform, sample.name, results.dir, max.as.seg.count, max.non.clonal, max.neg.genome, copy_num_type, maf.fn, …
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Parameters for ABSOLUTE on WGS data
written by shiyang93 •I want to use ABSOLUTE to estimate the purity of my WGS data. I have called the SNCA by BIC-seq and feed the seg data …
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