Is it possible to retrieve STRING data base ids using Uniprot.ws in R?
Hello Everyone,
Does anybody know if it is possible to get STRING data base ids using Uniprot.ws package in R? When checking for available columns() I do not see anything similar to STRING or STRING_ID, but may be it is hiding under some other names or is there another way to get them?
Thank you a lot for helping!
Best regards, Ivan
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You can use the Ensemble protein ids form UniProt to fetch STRING DB data.
Example UniProt KB links: https://string-db.org/network/9606.ENSP00000265724
9606 is the organism id and ENSP00000265724 is the protein identifier.