Tests and programs to know if any sequence is well assembled?

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5.5 years ago

irg21 • 0

Hi! What tests and programs could I use to know if any sequence is well assembled? Any suggestion?

Assembly sequencing • 714 views

ADD COMMENT • link 5.5 years ago by irg21 • 0

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If you want to assess the quality of the assembly then you can use QUAST.

ADD REPLY • link 5.5 years ago by Sej Modha 5.3k

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"Any sequence" is quite broad. Are you talking about prokaryotic genomes, eukaryotic genomes, amplicons, ...?

ADD REPLY • link 5.5 years ago by h.mon 35k

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