microarray, rna -seq

Hi Can we compare the studies conducted using microarray, RNA-seq and qRT-PCR??

rna-seq

• 1,453 views • link

written 7.9 years ago by bioinfo

What does "compare" mean for you?

If your question fits in one sentence then you haven't explained it enough.

• 1 views • link

written 7.9 years ago by WouterDeCoster

Yes

• 1 views • link

written 7.9 years ago by Devon Ryan

Yes. Take a look at RankProd

• 1 views • link

written 7.9 years ago by Kevin Blighe

0 answers

No answers yet.

More posts like this

RNA-seq data compared to qRT-PCR
written 1.7 years ago by SeoG •

Hello! We performed qRT-PCR on a specific gene and subsequently conducted bulk RNA-seq on the same samples. In the qRT-PCR results, the gene showed over …
How can studies compare microarray datas with rna-seq?
written 1.9 years ago by Znow •

I would like to compare RNA-seq data from TCGA BRCA with GEO microarray. I am going to make a risk score for predicitng prognosis bases …
Normalizing across multiple RNA-seq datasets
written 5.2 years ago by Gene_MMP8

I was wondering if there's any technique to pool together RNA-seq data from multiple studies and platforms and normalize them into one single dataset. For …
Possible evolutionary studies using whole genome and RNA-seq data
written 8.7 years ago by MAPK

Hi All, I have created this post to explore all the possible studies one could carry out with whole genome and RNA seq data for …
Generate ROC curve for RNA-seq/qRT-PCR data
written 8.9 years ago by James Ashmore

I'm trying to generate a ROC curve for different RNA-seq normalisations, using qRT-PCR data for comparison. I want to define True Positives from the RNA-seq …
Comparison of Affymetrix with other platforms
written 9.6 years ago by 786

Hi, I want to ask that most of the microarray data-based studies are conducted by using **Affymetrix** data. Although there are many other platforms on …
gene expression candidate for RT-PCR
written 10.5 years ago by loly.pearl86 •

Hi All, I want examine different gene expression for different treatment by using qRT-PCR, I will not do any sequencing or assembly. First RNA will …
Gene expression with assembly and without !!
written 10.7 years ago by loly.pearl86 •

Hi every one, I am new in bioinformatic and NGS field .So I have some points which I confused in and hope to find some …
confirmation RNA-seq's results
written 10.8 years ago by parviz Heidari •

We have RNA-seq data of tomato root and we wanted to confirm this data set with qRT-PCR so we selected some genes which involve in …
RNA-seq results do not match qRT-PCR results
written 11.8 years ago by xiaoyonf •

Hi all, Is there any possibility that the RNA-seq data do not agree with the qRT-PCR results? I don't have extensive experience in RNA-seq data …