Software for genome coordinates from alignment
Is there a package/software (preferably python) for coordinate conversation from alignment to genome?
For example i've done tblastx of a reference protein and obtained a number of alignments. Is it possible now to easily do any of these things:
1). Get coordinates of specific exons from reference protein, inside all my alignments?
2). Get genomic coordinates inside target organism (whichever it) is of these exons?
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tim.ivanov.92 •
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