Mauve export similarity
0
0
Entering edit mode
5.7 years ago
firestar ★ 1.6k

I am using Mauve multiple genome alignment tool v20150226 to align two fasta files. The GUI displays a line graph.

enter image description here

I think the line graph denotes a measure of similarity of that region in one sequence to the other. Is there some way to export this similarity measure as a text file? I would like to modify it and import that into IGV as a bedGraph.
multiple-sequence-alignment mauve • 1.3k views
ADD COMMENT •
0
Entering edit mode

Mauve should have given you an XMFA file of the alignment I think?

ADD REPLY •

Login before adding your answer.

Similar Posts
Loading Similar Posts
Traffic: 2745 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6