Distribution plots of poised enhancers
Hi all, Do you know any software can make figure for Distribution plots of poised enhancers? Thanks,
chip-seq
• 878 views
•
link
written
by
mikysyc2016
12
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Does ROSE include traditional enhancer in the analysis output?
written by b8921019 0Hi, I am doing super enhancer analysis with ROSE. I wonder whether the ROSE software can give the information of traditional enhancers or enhancers that …
-
Distribution of multi mapped reads
written by biogrin 4Hi all, Can anyone please help me figure out how can I discover the number of times multi-mapped reads align more often? And with those …
-
Handling manhattan plots in vector graphics editors
written by yury.barbitoff 2Hello all, I'd like to manually adjust appearance of several manhattan plots generated using ggplot2 and combine them into one nice figure for our paper. …
-
how to normalize tag count to 10 million reads without using homer?
written by mikysyc2016 12Hi, I know homer can normalize tag count to 10 million reads but do you know any other methods to do the normalize part except …
-
how to combine ChIP-seq and RNA-seq data
written by mikysyc2016 12Hi all, How i can combine ChIP-seq and RNA-seq data to figure out the candidate genes? Do you have any suggestion. Thanks,
-
can not upload bedgraph and bigwig data into WashU browser
written by mikysyc2016 12Hi all, I want to use Wash U browser to make figure for my ChIP-seq data. But I can not upload my bedgraph and bigwig …
-
want to pick up the strongest peaks in all the duplicates
written by mikysyc2016 12Hi, I have three duplicates for each group, i want to pick up the strongest peaks in all duplicates. Can you recommend software which can …
-
How to make a nice mutation overview figure like this?
written by Floris Brenk 103Hi all, Does anyone know how to make a nice mutation overview figure like this [nice figure][1]? I found a similar way to make these …
-
How To Make Visual Graphs To Represent Common Transcription Factor Binding Sites In Different Enha…
written by Diana 93<p>Hi all,</p> <p>I have a file that has enhancers in 1st column and the name of transcription factor in 2nd column for which it has …
-
Finding Similarities In Predicted Enhancers Of Different Genes
written by Diana 93Hi all, I have predicted enhancers for 6 genes. I want to compare these enhancers with each other to find a subset out of all …