Venue to publish a bioinformatics tool
I would like to (try to) publish a software I have been developing; the software is for analyzing and integrating data from ENCODE, and of course will be open source.
I know about Bioinformatics APPLICATIONS NOTES as a possible venue, but I would like to evaluate alternatives.
Can anyone point me to some valid journal accepting this kind of publications?
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Here are few journals to consider,
- BMC Bioinformatics
- Briefings in Bioinformatics
- Molecular systems biology
- PLOS Computational Biology
- GigaScience
- Nucleic Acids Research
- Genome Biology (Software)
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I had good experience with Molecular Informatics, after rejection by Bioinformatics. It is indexed by pubmed, and impact factor is just below 2.
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NAR has webserver and database issues. Pretty competitive.
F1000 software tools.
Alternatively you can let JANE figure this out for you.