Hello,

That could be a simple question, I try to mimic an input file using simple string. An exemple with bedtools.

bedtools getfasta -fi genome.fa -bed test.bed -fo output.fa

With in test.bed :

chr1    5    10

I would like to do something lile this :

bedtools getfasta -fi genome.fa -bed 'chr1\t5\t10' -fo output.fa

I try to echo my string but this failed. Any ideas ? Thanks