Hello people, how are you? I am looking to upgrade the notebook I currently use for bioinformatics. I have a Dell Inspiron (2017) 14-3467 i5-7ma …

Hello there, I am trying to index Gossypium hirsutum reference genome with STAR but the command stays for 2 days at **" starting to sort …

Hello, I would like to know the time taken for megan analysis. I have uploaded the .sam file almost 48-50 hours back(whole genome metagenome) and …

I'm trying to use **cd-hit** to generate a 0.9 sequence identity cutoff of the Blast NR database. Here's what I'm running: cd-hit -i nr -o …

I have confused Which file used as reference genome (.fasta, fa, gtf, etc.) Please tell me about exact command with example, if possible.

Any one have idea about STAR genome index file link, From where u can download? I unable to generate index file due to low configuration …

Hello all, I have started the assembly with Short insert and Long insert and Mate pair reads with 100X genome coverage. It has taken around …

Hello, I want to map some RNA-Seq files to human Transcript to see how much of them will be mapped to the transcriptome. I've downloaded …

I'd like to build hisat2 index for human genome. Here is my command: $extract_exons.py human.gtf > human.exon $extract_splice_sites.py human.gtf > human.ss $hisat2-build -p 4 human.fa …

Hi every one, I am indexing the human reference genome with BWA with following command: > bwa index -a bwtsw reference.fa but it fails to …