This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Can't upgrade deeptools 2.5.7 to 3.0 via conda 4.5.0 on Debian Jessie

Can't upgrade deeptools 2.5.7 to 3.0 via conda 4.5.0 on Debian Jessie

~$ conda update deeptools
Solving environment: done

# All requested packages already installed.

~$ conda install -c bioconda deeptools
Solving environment: done

# All requested packages already installed.

~$ deeptools --version
deeptools 2.5.7
deeptools
• 3,107 views • link
updated by Devon Ryan Devon Ryan • written by ZheFrench ZheFrench

1 answer

conda update deeptools works for me (just upgraded from 2.5.3), but you can always conda remove deeptools and then conda install deeptools.

• 0 views • link
written by Devon Ryan Devon Ryan

Humm strange...

conda remove deeptools
Solving environment: done

## Package Plan ##

  removed specs:
    - deeptools

The following packages will be REMOVED:

    deeptools: 2.5.7-py35_0 bioconda

Proceed ([y]/n)? y

Preparing transaction: done
Verifying transaction: done
Executing transaction: done

$ conda install deeptools
Solving environment: done

## Package Plan ##

  environment location: /home/bin/anaconda3

  added / updated specs:
    - deeptools


The following NEW packages will be INSTALLED:

    deeptools: 2.5.7-py35_0 bioconda

Proceed ([y]/n)?
• 0 views • link
written by ZheFrench ZheFrench

Log in to answer this question.

More posts like this