Remove background noise from DEG-list obtained from Tuxedo suite
I ran my data using tuxedo suite pipeline and obtained the DEG list. I would like to remove the background noise. Kindly suggest any methods or references.
• 1,568 views
•
link
written
by
vasanth.m.29 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
ONT methylation data background noise
written by marco.barr •
-
Data extraction from blastn aligned hit
written by khq5801 •
-
How do I chose variant quality filters for a VCF file?
written by James Reeve
-
How many genes in RNA seq?
written by Arindam Ghosh
-
Filtering the gene list using q-value instead if p-value
written by vasanth.m.29 •
-
Tools to do a linear or logistic regression of DEG
written by amy16 •
-
PCA Tools to analyse RNA-seq data
written by vasanth.m.29 •
-
Ideas to improve the New Tuxedo
written by XBria
-
hisat2 run gave 0% alignment
written by vinayjrao
-
methods for having accurate Microarray Data
written by tina.khajeh •
What exactly do you mean by background noise, please elaborate.
Such as false positive results. Please refer the following link. http://vinaykmittal.blogspot.com/2014/04/how-to-filter-out-background-noise-from.html