This is a test version of Biostars. For the public version, visit https://www.biostars.org.
write.fasta command - losing attributes/annotations

Hi,

Trying to use seqinr to create a FASTA file using the write.fasta command but in the final results I cannot retain the annotations of each sequences

write.fasta(finaldb,names(finaldb),"mydb", as.string=TRUE)

script working perfectly itself - my finaldb that I use as input has all attributes - names, annotations intact, but I lose annotations in the put "mydb".

HELP!

Chris

r

Please include the command line/code you are using by editing the post. Also include error messages, if any.

0 answers

No answers yet.

Log in to answer this question.