Gene fusion RNA-Seq benchmark data

Hi All, We are developing a new algorithm for detecting gene fusion using Illumina NGS short read data and face a challenge of finding a gold standard data set to benchmark our algorithm.

Anyone could suggest such NGS RNA-Seq data with known (verified) fusions that we can use to benchmark our algorithm?

Thank you so much!

rna-seq

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updated 8.5 years ago by Sean Davis

• written 8.5 years ago by tranthanhtuankhtn •

1 answer

One option:

http://www.tumorfusions.org/

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written 8.5 years ago by Sean Davis

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