[Please delete] Is there a well assembled fungi genome?
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Use Hi-C Sequence Data of close relative for scaffolding of genome.
written by SomeOne •Hi, I had this curious question "**Can we use HI-C sequencing data to assamble scaffolds to chromosomes from one isolate to other isolate?**" Let me …
-
How do we know that our contig sequence is really plasmid?
written by rickyalfaray •Hi everyone, I was confused about the method to confirm whether our contig sequence is really a plasmid or not. I have downloaded the whole …
-
Forum: What is the relationship between Medical Science & Computing (MSC) and NIH?
written by Chen Sun[Content restored by https://www.biostars.org/u/8494/ on 09-Mar-2023 from https://web.archive.org/web/20210416003230/https://www.biostars.org/p/493777/] OP had deleted the contents of this thread and replaced it with: > [delete] Please help delete …
-
How to detect different chromosomes from whole genome NGS reads of a fungi?
written by mrj •Hello, I have Paired-end NGS reads from a fungi. Inspecting 16S RNA points that the genome may be Aspergillus japonicus or related to it. 1. …
-
Align one gene (LAI) with a whole genome ( 32500 gene ) to find its location , or near location
written by raber82 •I am trying to find a gene inside a whole genome of Fungi which is consist of (32500 gene) .. But I have a sequence …
-
Repeat regions were contained in cds file (extracted from evm.out.gff3 by using Perl script)
written by Ginsea Chen<p>Dear all</p> <p>I predicted genes from a genome fragment by using EVM based on results of ab initio prediction, homologous sequences alignments and RNA-seq (trinity …
-
Repeat regions were contained in cds file (extracted from evm.out.gff3 by using Perl script)
written by Ginsea Chen<p>Dear all</p> <p>I predicted genes from a genome fragment by using EVM based on results of ab initio prediction, homologous sequences alignments and RNA-seq (trinity …
-
Mapping Contigs based on Reference Genome
written by Tanvir AhamedHello everyone, I have set of contigs form several bacterial genomes. Now I want to map and visualize those contigs based on a reference genome …
-
How To Download Venter Genome
written by Chen SunI want to download the Venter genome for comparing analysis with hg19. I follow the link: http://huref.jcvi.org/ and find there are several resources: - Genome …
-
How Do I Find The Complete Genome Of A. Fumigatus?
written by Layla •<p>Hi: I want to download the complete genome of the A. Fumigatus. I got the complete genomes list from ncbi available at: <a href='ftp://ftp.ncbi.nih.gov/genomes/Fungi/Aspergillus_fumigatus_uid14003/'>ftp://ftp.ncbi.nih.gov/genomes/Fungi/Aspergillus_fumigatus_uid14003/</a>. The …