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microarray data analysis

hello, i am working on microarray data, to find out differentially expressed genes. i want to use samr package to check fdr and tried to find out significantly differentially expressed gene. i have follow samr tutorial but it shows error.

1: In read.table(file = file, header = header, sep = sep, quote = quote,  :
  line 1 appears to contain embedded nulls
2: In read.table(file = file, header = header, sep = sep, quote = quote,

kindly suggest me tutorial. thanking you

samr

what chip/technology did you use in getting microarray data?

1 answer

I suggest this tutorial: Using Bioconductor for Microarray Analysis

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