Are regular illumina poly(a) rna-seq data suitable to study polyadenylation sites?
Hi all!
I have a question about is there a particular requirement for RNA-seq to study poly(A) in a species? I have many rna-seq data using poly(A) based library preparation method, but they are not designed to study alternative polyadenylation problem. From my understanding, the data should harbor all poly(A) information, but I am not sure whether I need an AT-rich designed RNA-seq?
Thank you in advance!
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
can someone please explain the DAPARS output?
written by PK •
-
alternative polyadenylation in RNA seq data
written by shrinka.genetics •
-
Can I perform differential gene expression with samples from Poly-A and Ribo-deplation ?
written by dganiewich
-
How to know a total-RNA-seq from NCBI?
written by baurumon •
-
ssRNA-seq:Why saying ignoring the orientation of transcription leads to an overestimation of expres…
written by harrypotterandsbt
-
Doing interspecies comparison using publicly deposited RNA-seq data
written by amy.bashir
-
Are all antisense transcripts from polyA enriched library RNA-seq polyadenylated?
written by Anny •
-
Identification of APAs (alternative polyadenylation) from standard RNA-seq
written by aln
-
Intron within the mRNA stranded-specific library
written by seta
-
Splicing programs to find alternative polyadenylation
written by kiminsigne •
