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How to run linksBed function from the Bedtools on a M. tuberculosis gene set?

Code

                    linksBed -i -org mycobacteria g1.bed > links2bed.html

does not work

g1.bed contains

                     AL123456   5123    7267    gyrB
                    AL123456    7302    9818    gyrA
                    AL123456    759808  763325  rpoB

How to run linksBed function from the Bedtools on a M. tuberculosis gene set?

bedtools links tuberculosis
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written by bioinform 3

do you know how to run linksBed function for a tuberculosis genes? what -org should be and database referenced?

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written by bioinform 3

Hello bioinform!

We believe that this post does not fit the main topic of this site.

It is unclear what you are asking, what have you tried?

For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.

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written by Michael Dondrup 5.6K

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