More posts like this
-
I have doubts regarding conducting meta-analysis of differentially expressed genes
written by Rohan •I have generated differential expression gene (DEG) lists separately for multiple OSCC (oral squamous cell carcinoma) datasets, microarray data processed with limma and RNA-Seq data …
-
Can I use Stouffer's Z method to do meta-meta-analysis or second order meta analysis?
written by andreas131298 •Hi everyone, I want to do meta-analysis based on some previous meta analyses study, and also some older independent studies on GWAS data. For example, …
-
Appropriate Pipeline for Methylation EPIC array analysis?
written by AnkitHi everyone, I have two questions. 1. Does anyone knows which tool is the best for Methylation EPIC array analysis? Something as useful as ChAMP. …
-
Genetic correlation in small sample using genome-wide data
written by javadjamshidi •Hi all Does anyone know what is the best method (software) to calculate genetic correlations in a small sample ( ~500) using genome-wide data? Thank …
-
Joint meta in METAL
written by Cindy •I am using METAL to perform a meta-analysis for interaction. On the wiki, it says "The joint meta-analysis method has been implemented though a patch …
-
Affymetrix Soybean Gene 1.1 ST Array PROBES IDs to Ensembl transcripts IDs
written by gaby_santos •Hi! I am trying to perform a differential expression analysis of microarray Soybean data, I wanted to use Ensembl ID information but I haven't been …
-
meta analysis for microarray data
written by bioinfoHi Can anyone suggest me the online tool for meta analysis of microarray data?? I tried to used some r packages but i am finding …
-
Microarray differential gene expression analysis using R
written by aharnishi02Hi, I am new to R and I am keen on learning how to conduct a microarray analysis using Bioconductor. what is the best resource …
-
Microarray data analysis (median detection pvalue)
written by payman.nickchi •Hi. I am currently doing Microarray data analysis on some dataset in GEO and I came up in one paper with the method "median detection …
-
Analysis Of Microarray Hits Using Bioinformatics Methods
written by Khader Shameer<p>I am working on the analysis of a vascular disease based case-control gene expression study. </p> <p>I am looking for some of the best-practice bioinformatics …
Please elaborate on your experimental design and aim of the analysis, the term meta-analysis is very broad and often used incorrectly.
hi i want to find common differentially expressed genes between several cancer types with impaired design
Please elaborate on your experimental design. You are wasting your and my time by being so aspecific in your question.