This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Connectivity Map Broad

Hello, I have a very simple question:

The Broad Institute has released the connectivity map some years ago. Which I would very much like to include in my project. So I found this R package which loads the Connectivity Map in R.

But my question is: The paper that came with the cMAP, says that the ranking is based on the Kolmogorov-Smirnov statistic and the connectivity score ranges from +1 to -1. But when I load the data from the beforementioned package, I get some scores that are 1000+ and no negatives.

Why is this happening?

cmap broad

0 answers

No answers yet.

Log in to answer this question.