hardy weinberg equilibrium
Hello everybody,
I am trying to figure out which could be a good hardy weinberg equilibrium p-value cutoff for a set of around 40 millions snps coming from whole genome sequencing data of about 2000 people.
Thanks
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reds.nik •
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It's a very long topic! To start, you could give a look to this post on Biostars and to this tutorial on data cleaning for GWAS at paragraph 2.4