Gblocks does not accept multiple alignment with different sequences length
Hi I'm trying to use Gblocks to select conserved blocks from multiple alignments of LSU gene. The application does not accept my data file because the length of the sequences is different. So I'm wondering if there is any way to process my sequences in Gblocks.
• 3,296 views
•
link
written
by
ahmed_bio82 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
GPU-accelerated multiple sequence alignment tools
written by jet •
-
There are gaps where mismatches should be in pairwise alignment (Biopython-pairwise2)
written by M. •
-
Identify conserved regions in SARS-COV2 virus based on Multiple sequence alignment for primer design
written by Mohamed Elsherbieny •
-
Gblock multiple alignment
written by baurumon •
-
Multiple Sequence Alignment for >20 Sequences
written by griffinwhy •
-
Ensembl Multiple Genome alignments do not yield the same as pairwise alignments
written by except.for.me.and.my.monkey •
-
ClustalO input file
written by shirani.s •
-
Gblocks: understanding flank positions
written by beccy.hagen •
-
Quantifying Sequence Divergence In An Alignment
written by Sankalp Sharma •
-
How To Select Protein Sequences For Multiple Alignment ?
written by Bilouweb
Trim your aligned sequences so all have the same length.