Cannot install SCI-PHY v3, configure script lacking?

Does anybody know how to install the SCI-PHY 3 phylogenomics package from Berkely. It seems the configure script is lacking. It is a C or C++ package

phyogenomics

• 1,512 views • link

written 9.2 years ago by Arjen Ten Have

Please post a link, sometimes the authors rely on the Makefile only, what happens if you type make in the src directory?

• 0 views • link

written 9.2 years ago by Michael Dondrup

0 answers

No answers yet.

More posts like this

Which GPU for local Colabfold
written 3.8 years ago by Arjen Ten Have

Hi, I could use some help on setting up a local install for Colabfold, I just don't seem to get clear intel from all those …
How to install DASQV?
written 9.2 years ago by biomagician

Dear all, I would like to use the DASQV software to scrub pacbio reads. https://github.com/thegenemyers/DASCRUBBER Does anybody know how to install it? Thanks. C.
Install kraken on Mac OS
written 9.3 years ago by biomagician

Dear all, Does anybody know how to install Kraken on Mac OS? http://www.ebi.ac.uk/research/enright/software/kraken Best, C.
MrBayes on Kepler K40 GPU: What dependencies do I need? Beagle, MPI or both?
written 10.8 years ago by Arjen Ten Have

The title covers most of it. I want to run MrBayes chains on a machine equipped with a KeplerK40 GPU. I am very confused regarding …
Is BLAST using Needleman-Wunsch or Smith-Waterman when aliging in between HSSPs?
written 11.6 years ago by Arjen Ten Have

I am going thru my lectures for next month postgrad course and ran into a doubt. To me it would make sense to apply Needleman-Wunsch …
GPU implementation Tesla Kepler accelerator?
written 11.7 years ago by Arjen Ten Have

I want to buy a GPU in order to obtain more computing power. This is not such an easy thing here in Argentina since I …
Bayesian Phylogeny For Very Divergent Dataset?
written 12.4 years ago by Arjen Ten Have

A reviewer asked me to complement a maximum likelihood phylogeny with a Bayesian tree. Intuitively I think Bayes has problems with large divergent datasets (similarity …
Expected Mutation Rate Matrix
written 13.3 years ago by Arjen Ten Have

In an attempt to identify new subfamilies I would like to use the matrix that is the basis of PAM and Blosum. That is, the …
Plotting Selection On Structures
written 14.2 years ago by Arjen Ten Have

Similar to Evolutionary Trace, it should be possible to plot levels of selection (omega or a related number) on existing structures. But all I can …
Manual Msa Editor
written 14.4 years ago by Arjen Ten Have

Does anybody know a good manual editor of multiple sequence alignments. I have been using Genedoc for ages but it really molests me that it …