the time seriers data format for WGCNA
Hi everyone: I am doing WGCNA analysis using my time series data. Now I have the .CEL files. I processed the data using mas5calls function and got 20,000 probes after filtering. But I got too many modules after merging. I want to know 1. What is the most appropriate method for the preparation of WGCNA format file from the .CEL file. 2. Are the probes are suitable for WGCNA. Should I transform them to gene symbol? Thanks deeply
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